CDS

Accession Number TCMCG065C30576
gbkey CDS
Protein Id XP_004981958.1
Location join(7032943..7035007,7035256..7036072,7036248..7036544,7036657..7036873)
Gene LOC101775110
GeneID 101775110
Organism Setaria italica

Protein

Length 1131aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004981901.2
Definition phytochrome a [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category H
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCCTCGAGGCCTACTCAGTCTTCCACTTCATCCAGCAGGACTCGCCAGAGCTCCCGAGCGAGGATATTAGCACAAACAACCCTTGATGCTGAACTGAATGCTGAGTATGAAGAATCTGGTGATTCCTTTGATTACTCCAAGTTGGTTGAAGCGCAGCGGACTGCTCCACCTGAGCAGCAAGGGCGTTCAGAGAAGGTCATAGCCTACTTGCAGCACATTCAGAGAGGAAAGCTAATCCAACCATTTGGTTGCTTGTTGGCCCTTGATGAGAAGAGCTTCCGGGTCATTGCATTCAGTGAGAATGCTCCAGAAATGCTTACAACAGTCAGCCATGCCGTGCCTAATGTTGATGGTCCCCCAAAGTTAGGAATTGGCACCAATGTGCGCTCCCTTTTCACTGACCCTGGTGCCACAGCACTGCAGAAGGCACTAGGATTTGCTGACGTTTCTTTGCTGAATCCTATTCTAGTTCAATGCAAGACCTCAGGCAAGCCATTCTATGCCATTGTTCATAGGGCAACTGGTTGTCTGGTGGTGGATTTTGAGCCTGTGAAACCTACAGAATTTCCTGCCACTGCTGCTGGGGCTTTGCAGTCTTACAAGCTTGCTGCTAAGGCAATCTCCAAGATCCAGTCACTACCAGGTGGGAGCATGGAGGCCTTATGCAATACTGTGGTTAAGGAAGTCTTTGACCTTACAGGTTACGACAGGGTTATGGCTTACAAGTTCCACGAAGATGAGCATGGGGAGGTCTTTGCCGAGATCACAAAACCTGGTATTGAGCCTTATCTTGGCCTTCACTATCCGGCCACTGATATCCCTCAAGCTGCCAGGTTTCTTTTCATGAAGAACAAAGTACGAATGATCTGTGATTGTCGTGCAAGATCTGTGAAGATTATTGAAGACGAGGCACTCTCCATTGATATTAGCTTGTGTGGTTCAACTCTTAGAGCACCACACAGTTGTCACCTTCAGTATATGGAGAACATGAACTCAATTGCATCCCTTGTCATGGCTGTTGTGGTCAATGAAAATGAAGAAGATGATGAACCCGAGCCTGAGCAACCACCACAGCAGCAGAAGAAGAAGAGGCTGTGGGGTCTCATTGTTTGCCACCATGAGAGCCCCAGATATGTCCCGTTTCCACTGCGCTATGCTTGTGAATTCTTAGCACAAGTGTTTGCTGTCCATGTCAACAAGGAGTTTGAATTAGAGAAGCAGATACGAGAGAAAAGCATTCTACGAATGCAAACAATGCTCTCTGACATGCTATTCAGGGAAGCATCTCCCTTGAGTATCATATCTGGGAGTCCAAATATCATGGACCTAGTTAGATGTGATGGTGCTGCTCTTTTGTATGGGGACAAAGTATGGCGCCTCCAAACGGCTCCAACTGAGTCTCAGATACGTGATATTGCTTTCTGGCTTTCAGAAGTTCATAGGGATTCCACTGGCTTGAGTACTGACAGCCTCCAGGATGCTGGATATCCAGGAGCTGCCTCCCTTGGTGACATGATTTGTGGAATGGCAGTGGCTAAGATAACTTCCAAGGATGTTCTTTTCTGGTTCAGGTCACATACAGCTGCTGAAATCAAATGGGGAGGTGCAAAGCATGATCCATCTGATAAGGACGACAACAGAAGGATGCACCCAAGGTTGTCCTTCAAGGCATTCCTTGAGGTTGTCAAGATGAAGAGTTTGCCATGGAATGACTATGAGATGGATGCTATTCACTCATTGCAACTTATACTTAGAGGTACACTGACTGATGCCATGAAGCCGGCCCGGACATCTGTTTTAGATAACCAGATTGGTGACCTCAAACTTGATGGGCTTGCTGAATTGCAGGCAGTGACAAGTGAAATGGTTCGCCTAATGGAAACAGCAACTGTTCCGATCTTGGCAGTAGATGGCAATGGATTGGTCAATGGATGGAATCAAAAGGTAGCAGAATTGACGGGATTGAGAGTTGATGAGGCTATAGGAAGACACATACTTACACTTGTGGAGGATTCTTCTGTATCAACTGTTCAGAGGATGCTATACTTAGCTCTACAGGGCAGAGAAGAGAAGGAGGTTCGGTTTGAGTTGAAAACACATGGCTCCAAGAGGGATGATGGCCCTGTTATCTTGGTTGTAAATGCTTGTGCCAGTCGTGACCTTCATGACCACGTTGTTGGGGTGTGCTTTGTAGCCCAAGATATGACTGTTCATAAGTTGGTCATGGATAAATTCACTCGTGTTGAAGGGGACTACAAGGCAATCGTTCACAACCCGAACCCACTCATTCCTCCCATATTTGGTGCTGACCAATTTGGGTGGTGCTCTGAGTGGAATGCAGCCATGACCAAGCTTACTGGGTGGCACAGAGATGATGTGATTGATAAGATGCTCCTTGGTGAGGTTTTTGATAGCAGCAATGCTTCATGCCTTTTGAAGAACAAAGACGCATTTGTGCATCTCTGCATCATCATCAACAGTGCATTAGCCGGTGACGAGGCAGAAAAGGCTCCATTTGGCTTCTTTGACCGGAATGGGAAGTACATTGAGTGTCTTCTTTCAGTGAACAGAAAAGTAAATGCAGATGGTGTTGTCACCGGAGTGTTCTGTTTCATTCATGTTCCTAGTGATGAGCTGCAGCATGCACTACATGTGCAGCAAGCCTCGGAGCAGACAGCAGTAAGGAGGTTGAAGGCTTTCTCGTACATGCGACATGCCATAAACAAACCTCTCTCAGGTATGCTTTATTCTAGGGAAGCGCTCAAGAGCACAGGTCTGAATGAAGAGCAGATGAGGCAGGTCCATGTCGCGGATAGTTGTCATCACCAGCTAAACAAGATACTTACCGACTTGGATCAAGATAACATAACTGACAAGTCAAGTAGTTTGGATTTGGATATGGCTGAATTTGTGTTGCAAGATGTGGTGGTGGCTGCAGTCAGTCAAGTACTGATAGGTTGCCAGGGTAAAGGGATCAGAGTTTCTTGCAATCTGCCAGAGAGATTCATGAAGCAAAAAGTGTACGGCGATGGTATTCGGCTCCAGCAGATCCTCTCTGACTTCCTATTTGTTTCAGTGAAGTTCTCTCCTGCTGGAGGTTCTGTTGATATCTCTTCCAAACTGACTAAGAACAGCATTGGAGAAAATCTCCATCTCATAGACCTGGAGCTAAGGATAAAGCAGCAGGGAACAGGAGTCCCAGCAGAAATAATATCACAAATGTATGAGGAGGAGAATAAGGAACAATCAGAAGAGGGCTTGAGCCTTCTTGTTTCTAGAAACCTTCTGAGGCTCATGAATGGTGATATTCGTCACATGAGGGAAGCTGGCATGTCAACATTCATCCTTACCGCTGAACTTGCCTCTGCCCCTACCGCCCCTGGACAATGA
Protein:  
MSSSRPTQSSTSSSRTRQSSRARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRTAPPEQQGRSEKVIAYLQHIQRGKLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDGPPKLGIGTNVRSLFTDPGATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHESPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFREASPLSIISGSPNIMDLVRCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHRDSTGLSTDSLQDAGYPGAASLGDMICGMAVAKITSKDVLFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILRGTLTDAMKPARTSVLDNQIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELTGLRVDEAIGRHILTLVEDSSVSTVQRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIVHNPNPLIPPIFGADQFGWCSEWNAAMTKLTGWHRDDVIDKMLLGEVFDSSNASCLLKNKDAFVHLCIIINSALAGDEAEKAPFGFFDRNGKYIECLLSVNRKVNADGVVTGVFCFIHVPSDELQHALHVQQASEQTAVRRLKAFSYMRHAINKPLSGMLYSREALKSTGLNEEQMRQVHVADSCHHQLNKILTDLDQDNITDKSSSLDLDMAEFVLQDVVVAAVSQVLIGCQGKGIRVSCNLPERFMKQKVYGDGIRLQQILSDFLFVSVKFSPAGGSVDISSKLTKNSIGENLHLIDLELRIKQQGTGVPAEIISQMYEEENKEQSEEGLSLLVSRNLLRLMNGDIRHMREAGMSTFILTAELASAPTAPGQ